ENSG00000172171


Homo sapiens

Features
Gene ID: ENSG00000172171
  
Biological name :TEFM
  
Synonyms : Q96QE5 / TEFM / transcription elongation factor, mitochondrial
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q11.2
Gene start: 30897336
Gene end: 30906820
  
Corresponding Affymetrix probe sets: 219146_at (Human Genome U133 Plus 2.0 Array)   238295_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000306574
Ensembl peptide - ENSP00000462963
Ensembl peptide - ENSP00000462973
NCBI entrez gene - 79736     See in Manteia.
OMIM - 616422
RefSeq - XM_006722084
RefSeq - NM_024683
RefSeq Peptide - NP_078959
swissprot - Q96QE5
swissprot - J3KTG7
Ensembl - ENSG00000172171
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tefmENSDARG00000100548Danio rerio
 TefmENSMUSG00000046909Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR010994  RuvA domain 2-like
 IPR012337  Ribonuclease H-like superfamily
 IPR036397  Ribonuclease H superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006119 oxidative phosphorylation IMP
 biological_processGO:0006259 DNA metabolic process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006390 mitochondrial transcription IMP
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 cellular_componentGO:0042645 mitochondrial nucleoid IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030337 DNA polymerase processivity factor activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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