ENSMUSG00000046909


Mus musculus

Features
Gene ID: ENSMUSG00000046909
  
Biological name :Tefm
  
Synonyms : Q5SSK3 / Tefm / transcription elongation factor, mitochondrial
  
Possible biological names infered from orthology : Q96QE5
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: B5
Gene start: 80136678
Gene end: 80142175
  
Corresponding Affymetrix probe sets: 10389005 (MoGene1.0st)   1452256_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000059304
Ensembl peptide - ENSMUSP00000114770
Ensembl peptide - ENSMUSP00000122596
NCBI entrez gene - 68550     See in Manteia.
MGI - MGI:1915800
RefSeq - XM_011249204
RefSeq - NM_183275
RefSeq Peptide - NP_899098
swissprot - B7ZCA9
swissprot - Q5SSK3
swissprot - F7CPB7
Ensembl - ENSMUSG00000046909
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tefmENSDARG00000100548Danio rerio
 TEFMENSG00000172171Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR010994  RuvA domain 2-like
 IPR036397  Ribonuclease H superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006119 oxidative phosphorylation IEA
 biological_processGO:0006259 DNA metabolic process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006390 mitochondrial transcription IEA
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005759 mitochondrial matrix ISO
 cellular_componentGO:0042645 mitochondrial nucleoid ISS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0030337 DNA polymerase processivity factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr