ENSG00000172260


Homo sapiens

Features
Gene ID: ENSG00000172260
  
Biological name :NEGR1
  
Synonyms : NEGR1 / neuronal growth regulator 1 / Q7Z3B1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p31.1
Gene start: 71395940
Gene end: 72282734
  
Corresponding Affymetrix probe sets: 1553194_at (Human Genome U133 Plus 2.0 Array)   229461_x_at (Human Genome U133 Plus 2.0 Array)   239548_at (Human Genome U133 Plus 2.0 Array)   243357_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000305938
Ensembl peptide - ENSP00000350364
NCBI entrez gene - 257194     See in Manteia.
OMIM - 613173
RefSeq - XM_011541200
RefSeq - NM_173808
RefSeq Peptide - NP_776169
swissprot - Q7Z3B1
Ensembl - ENSG00000172260
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 negr1ENSDARG00000021607Danio rerio
 NEGR1ENSGALG00000011350Gallus gallus
 Negr1ENSMUSG00000040037Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LSAMP / Q13449 / limbic system-associated membrane proteinENSG0000018556551
OPCML / Q14982 / opioid binding protein/cell adhesion molecule likeENSG0000018371546
NTM / Q9P121 / neurotriminENSG0000018266745
A6NGN9 / IGLON5 / IgLON family member 5ENSG0000014254938


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006501 C-terminal protein lipidation TAS
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007626 locomotory behavior IEA
 biological_processGO:0007631 feeding behavior IEA
 biological_processGO:0010976 positive regulation of neuron projection development IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Post-translational modification: synthesis of GPI-anchored proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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