ENSG00000185565


Homo sapiens

Features
Gene ID: ENSG00000185565
  
Biological name :LSAMP
  
Synonyms : limbic system-associated membrane protein / LSAMP / Q13449
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q13.31
Gene start: 115802363
Gene end: 117139389
  
Corresponding Affymetrix probe sets: 1570190_at (Human Genome U133 Plus 2.0 Array)   214460_at (Human Genome U133 Plus 2.0 Array)   228218_at (Human Genome U133 Plus 2.0 Array)   229244_at (Human Genome U133 Plus 2.0 Array)   235111_at (Human Genome U133 Plus 2.0 Array)   235494_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000443429
Ensembl peptide - ENSP00000328455
Ensembl peptide - ENSP00000418506
Ensembl peptide - ENSP00000419000
NCBI entrez gene - 4045     See in Manteia.
OMIM - 603241
RefSeq - XM_017006383
RefSeq - NM_001318915
RefSeq - NM_002338
RefSeq - XM_011512840
RefSeq Peptide - NP_001305844
RefSeq Peptide - NP_002329
swissprot - C9J5G3
swissprot - F5H5G1
swissprot - H3BLU2
swissprot - Q13449
Ensembl - ENSG00000185565
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LSAMPENSDARG00000103069Danio rerio
 LSAMPENSGALG00000040620Gallus gallus
 LsampENSMUSG00000061080Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NEGR1 / Q7Z3B1 / neuronal growth regulator 1ENSG0000017226053
NTM / Q9P121 / neurotriminENSG0000018266752
OPCML / Q14982 / opioid binding protein/cell adhesion molecule likeENSG0000018371552
A6NGN9 / IGLON5 / IgLON family member 5ENSG0000014254947


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006501 C-terminal protein lipidation TAS
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007399 nervous system development TAS
 biological_processGO:0035641 locomotory exploration behavior IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Post-translational modification: synthesis of GPI-anchored proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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