ENSG00000172493


Homo sapiens

Features
Gene ID: ENSG00000172493
  
Biological name :AFF1
  
Synonyms : AF4/FMR2 family member 1 / AFF1 / P51825
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q21.3
Gene start: 86935002
Gene end: 87141054
  
Corresponding Affymetrix probe sets: 201924_at (Human Genome U133 Plus 2.0 Array)   211826_s_at (Human Genome U133 Plus 2.0 Array)   215451_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000424766
Ensembl peptide - ENSP00000424483
Ensembl peptide - ENSP00000424881
Ensembl peptide - ENSP00000440843
Ensembl peptide - ENSP00000427593
Ensembl peptide - ENSP00000425755
Ensembl peptide - ENSP00000305689
Ensembl peptide - ENSP00000378578
NCBI entrez gene - 4299     See in Manteia.
OMIM - 159557
RefSeq - XM_017008216
RefSeq - NM_001166693
RefSeq - NM_001313959
RefSeq - NM_001313960
RefSeq - NM_005935
RefSeq - XM_005263007
RefSeq - XM_005263009
RefSeq - XM_005263011
RefSeq - XM_005263013
RefSeq - XM_011531973
RefSeq - XM_017008215
RefSeq Peptide - NP_001300888
RefSeq Peptide - NP_001300889
RefSeq Peptide - NP_005926
RefSeq Peptide - NP_001160165
swissprot - F5GXF9
swissprot - H0Y9S4
swissprot - P51825
swissprot - D6RAU0
swissprot - E7ETI4
swissprot - E7EMC5
swissprot - D6RIZ5
Ensembl - ENSG00000172493
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AFF1ENSGALG00000043935Gallus gallus
 Aff1ENSMUSG00000029313Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AFF4 / Q9UHB7 / AF4/FMR2 family member 4ENSG0000007236438
AFF2 / P51816 / AF4/FMR2 family member 2ENSG0000015596631
AFF3 / P51826 / AF4/FMR2 family member 3ENSG0000014421831


Protein motifs (from Interpro)
Interpro ID Name
 IPR007797  Transcription factor AF4/FMR2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0008023 transcription elongation factor complex IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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