ENSG00000174446


Homo sapiens

Features
Gene ID: ENSG00000174446
  
Biological name :SNAPC5
  
Synonyms : O75971 / small nuclear RNA activating complex polypeptide 5 / SNAPC5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q22.31
Gene start: 66490135
Gene end: 66497813
  
Corresponding Affymetrix probe sets: 1554093_a_at (Human Genome U133 Plus 2.0 Array)   213203_at (Human Genome U133 Plus 2.0 Array)   214592_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000455680
Ensembl peptide - ENSP00000457892
Ensembl peptide - ENSP00000456716
Ensembl peptide - ENSP00000308439
Ensembl peptide - ENSP00000319597
Ensembl peptide - ENSP00000378954
Ensembl peptide - ENSP00000454421
Ensembl peptide - ENSP00000455626
NCBI entrez gene - 10302     See in Manteia.
OMIM - 605979
RefSeq - NM_006049
RefSeq Peptide - NP_001316544
RefSeq Peptide - NP_006040
swissprot - O75971
swissprot - H3BQA0
swissprot - H3BSI3
swissprot - A0A024R5X1
Ensembl - ENSG00000174446
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snapc5ENSDARG00000062476Danio rerio
 SNAPC5ENSGALG00000007695Gallus gallus
 Snapc5ENSMUSG00000032398Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029138  snRNA-activating protein complex subunit 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006384 transcription initiation from RNA polymerase III promoter IEA
 biological_processGO:0042795 snRNA transcription by RNA polymerase II TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0016604 nuclear body IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes
RNA Polymerase III Abortive And Retractive Initiation
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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