ENSGALG00000007695


Gallus gallus

Features
Gene ID: ENSGALG00000007695
  
Biological name :SNAPC5
  
Synonyms : small nuclear RNA activating complex polypeptide 5 / SNAPC5
  
Possible biological names infered from orthology : O75971
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 18525881
Gene end: 18528303
  
Corresponding Affymetrix probe sets: Gga.6990.1.S1_s_at (Chicken Array)   Gga.6990.2.S1_at (Chicken Array)   GgaAffx.13081.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012456
NCBI entrez gene - 415550     See in Manteia.
RefSeq - NM_001007829
RefSeq Peptide - NP_001007830
swissprot - Q5ZI06
Ensembl - ENSGALG00000007695
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snapc5ENSDARG00000062476Danio rerio
 O75971ENSG00000174446Homo sapiens
 Snapc5ENSMUSG00000032398Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029138  snRNA-activating protein complex subunit 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0006384 transcription initiation from RNA polymerase III promoter IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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