ENSMUSG00000032398


Mus musculus

Features
Gene ID: ENSMUSG00000032398
  
Biological name :Snapc5
  
Synonyms : small nuclear RNA activating complex polypeptide 5 / Snapc5
  
Possible biological names infered from orthology : O75971
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: C
Gene start: 64179274
Gene end: 64183132
  
Corresponding Affymetrix probe sets: 10586176 (MoGene1.0st)   1427999_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000034965
NCBI entrez gene - 330959     See in Manteia.
MGI - MGI:1914282
RefSeq - NM_183316
RefSeq Peptide - NP_899139
swissprot - E9QPK5
Ensembl - ENSMUSG00000032398
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snapc5ENSDARG00000062476Danio rerio
 SNAPC5ENSGALG00000007695Gallus gallus
 O75971ENSG00000174446Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR029138  snRNA-activating protein complex subunit 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006384 transcription initiation from RNA polymerase III promoter IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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