ENSG00000175040


Homo sapiens

Features
Gene ID: ENSG00000175040
  
Biological name :CHST2
  
Synonyms : carbohydrate sulfotransferase 2 / CHST2 / Q9Y4C5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q24
Gene start: 143119331
Gene end: 143124014
  
Corresponding Affymetrix probe sets: 203921_at (Human Genome U133 Plus 2.0 Array)   243478_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000307911
NCBI entrez gene - 9435     See in Manteia.
OMIM - 603798
RefSeq - NM_004267
RefSeq Peptide - NP_004258
swissprot - Q9Y4C5
swissprot - V9HVX9
Ensembl - ENSG00000175040
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chst2aENSDARG00000075007Danio rerio
 chst2bENSDARG00000058585Danio rerio
 CHST2ENSGALG00000034507Gallus gallus
 Chst2ENSMUSG00000033350Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHST7 / Q9NS84 / carbohydrate sulfotransferase 7ENSG0000014711938
CHST6 / Q9GZX3 / carbohydrate sulfotransferase 6ENSG0000018319627
CHST5 / Q9GZS9 / carbohydrate sulfotransferase 5ENSG0000013570227
CHST4 / Q8NCG5 / carbohydrate sulfotransferase 4ENSG0000014083524
CHST1 / O43916 / carbohydrate sulfotransferase 1ENSG0000017526423
CHST3 / Q7LGC8 / carbohydrate sulfotransferase 3ENSG0000012286320


Protein motifs (from Interpro)
Interpro ID Name
 IPR000863  Sulfotransferase domain
 IPR016469  Carbohydrate sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006044 N-acetylglucosamine metabolic process IDA
 biological_processGO:0006790 sulfur compound metabolic process IDA
 biological_processGO:0006954 inflammatory response TAS
 biological_processGO:0007275 multicellular organism development TAS
 biological_processGO:0018146 keratan sulfate biosynthetic process TAS
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031228 intrinsic component of Golgi membrane NAS
 molecular_functionGO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity TAS
 molecular_functionGO:0008146 sulfotransferase activity TAS
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr