ENSDARG00000075007


Danio rerio

Features
Gene ID: ENSDARG00000075007
  
Biological name :chst2a
  
Synonyms : carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2a / chst2a
  
Possible biological names infered from orthology : carbohydrate sulfotransferase 2 / CHST2 / Q80WV3 / Q9Y4C5
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 8112449
Gene end: 8114608
  
Corresponding Affymetrix probe sets: Dr.15824.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000118233
NCBI entrez gene - 561896     See in Manteia.
RefSeq - NM_001079995
RefSeq Peptide - NP_001073464
swissprot - A5PM89
ZFIN ID - ZDB-GENE-060929-40
Ensembl - ENSDARG00000075007
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHST2ENSGALG00000034507Gallus gallus
 CHST2ENSG00000175040Homo sapiens
 Chst2ENSMUSG00000033350Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chst2b / carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b / CHST2* / Q80WV3* / Q9Y4C5* / carbohydrate sulfotransferase 2*ENSDARG0000005858576
chst7 / carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 / Q9EP78* / Q9NS84* / carbohydrate sulfotransferase 7*ENSDARG0000004434138
CHST6 / zgc:194879 / CHST4* / CHST5* / Q8NCG5* / Q9GZS9* / Q9GZX3* / Q9QUP4* / carbohydrate sulfotransferase 5* / carbohydrate sulfotransferase 6* / carbohydrate sulfotransferase 4*ENSDARG0000006135726
chst1 / carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 / O43916* / Q9EQC0* / carbohydrate sulfotransferase 1*ENSDARG0000008859326
si:ch73-62b13.1ENSDARG0000009326924
chst3a / carbohydrate (chondroitin 6) sulfotransferase 3a / CHST3* / O88199* / Q7LGC8* / carbohydrate sulfotransferase 3*ENSDARG0000006107021
chst3b / carbohydrate (chondroitin 6) sulfotransferase 3b / CHST3* / Q7LGC8* / carbohydrate sulfotransferase 3*ENSDARG0000011604214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000863  Sulfotransferase domain
 IPR016469  Carbohydrate sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006790 sulfur compound metabolic process IBA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity IBA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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