ENSDARG00000061357


Danio rerio

Features
Gene ID: ENSDARG00000061357
  
Biological name :CHST6
  
Synonyms : CHST6 / zgc:194879
  
Possible biological names infered from orthology : carbohydrate sulfotransferase 4 / carbohydrate sulfotransferase 5 / carbohydrate sulfotransferase 6 / CHST4 / CHST5 / Q8NCG5 / Q9GZS9 / Q9GZX3 / Q9QUP4
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 34862225
Gene end: 34870891
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124000
NCBI entrez gene - 100170782     See in Manteia.
RefSeq - NM_001130621
RefSeq Peptide - NP_001124093
swissprot - B3DIF5
ZFIN ID - ZDB-GENE-060810-74
Ensembl - ENSDARG00000061357
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHST4ENSGALG00000000901Gallus gallus
 CHST6ENSGALG00000000913Gallus gallus
 CHST4ENSG00000140835Homo sapiens
 CHST5ENSG00000135702Homo sapiens
 CHST6ENSG00000183196Homo sapiens
 Chst4ENSMUSG00000035930Mus musculus
 Chst5ENSMUSG00000031952Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chst1 / carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 / O43916* / Q9EQC0* / carbohydrate sulfotransferase 1*ENSDARG0000008859331
si:ch73-62b13.1ENSDARG0000009326930
chst2a / carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2a / CHST2* / Q80WV3* / Q9Y4C5* / carbohydrate sulfotransferase 2*ENSDARG0000007500730
chst7 / carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 / Q9EP78* / Q9NS84* / carbohydrate sulfotransferase 7*ENSDARG0000004434129
chst2b / carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b / CHST2* / Q80WV3* / Q9Y4C5* / carbohydrate sulfotransferase 2*ENSDARG0000005858529
chst3a / carbohydrate (chondroitin 6) sulfotransferase 3a / CHST3* / O88199* / Q7LGC8* / carbohydrate sulfotransferase 3*ENSDARG0000006107028
chst3b / carbohydrate (chondroitin 6) sulfotransferase 3b / CHST3* / Q7LGC8* / carbohydrate sulfotransferase 3*ENSDARG0000011604219


Protein motifs (from Interpro)
Interpro ID Name
 IPR000863  Sulfotransferase domain
 IPR016469  Carbohydrate sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006790 sulfur compound metabolic process IBA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity IBA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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