ENSDARG00000093269


Danio rerio

Features
Gene ID: ENSDARG00000093269
  
Biological name :si:ch73-62b13.1
  
Synonyms : si:ch73-62b13.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 15175478
Gene end: 15188054
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120347
Ensembl peptide - ENSDARP00000146607
NCBI entrez gene - 100002270     See in Manteia.
RefSeq - NM_001082951
RefSeq Peptide - NP_001076420
swissprot - Q1LWC9
ZFIN ID - ZDB-GENE-050420-366
Ensembl - ENSDARG00000093269
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chst1 / carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 / O43916* / Q9EQC0* / carbohydrate sulfotransferase 1*ENSDARG0000008859350
chst3a / carbohydrate (chondroitin 6) sulfotransferase 3a / CHST3* / O88199* / Q7LGC8* / carbohydrate sulfotransferase 3*ENSDARG0000006107037
CHST6 / zgc:194879 / CHST4* / CHST5* / Q8NCG5* / Q9GZS9* / Q9GZX3* / Q9QUP4* / carbohydrate sulfotransferase 5* / carbohydrate sulfotransferase 6* / carbohydrate sulfotransferase 4*ENSDARG0000006135729
chst2b / carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b / CHST2* / Q80WV3* / Q9Y4C5* / carbohydrate sulfotransferase 2*ENSDARG0000005858528
chst2a / carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2a / CHST2* / Q80WV3* / Q9Y4C5* / carbohydrate sulfotransferase 2*ENSDARG0000007500726
chst7 / carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 / Q9EP78* / Q9NS84* / carbohydrate sulfotransferase 7*ENSDARG0000004434125
chst3b / carbohydrate (chondroitin 6) sulfotransferase 3b / CHST3* / Q7LGC8* / carbohydrate sulfotransferase 3*ENSDARG0000011604221


Protein motifs (from Interpro)
Interpro ID Name
 IPR000863  Sulfotransferase domain
 IPR016469  Carbohydrate sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006790 sulfur compound metabolic process IBA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity IBA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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