ENSDARG00000061070


Danio rerio

Features
Gene ID: ENSDARG00000061070
  
Biological name :chst3a
  
Synonyms : carbohydrate (chondroitin 6) sulfotransferase 3a / chst3a
  
Possible biological names infered from orthology : carbohydrate sulfotransferase 3 / CHST3 / O88199 / Q7LGC8
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 29510023
Gene end: 29520852
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000148553
Ensembl peptide - ENSDARP00000081146
NCBI entrez gene - 559721     See in Manteia.
RefSeq - NM_001145571
RefSeq Peptide - NP_001139043
swissprot - B8A5X2
ZFIN ID - ZDB-GENE-090312-180
Ensembl - ENSDARG00000061070
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHST3ENSGALG00000024056Gallus gallus
 CHST3ENSG00000122863Homo sapiens
 Chst3ENSMUSG00000057337Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch73-62b13.1ENSDARG0000009326938
chst3b / carbohydrate (chondroitin 6) sulfotransferase 3b / CHST3* / Q7LGC8* / carbohydrate sulfotransferase 3*ENSDARG0000011604237
chst1 / carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 / O43916* / Q9EQC0* / carbohydrate sulfotransferase 1*ENSDARG0000008859337
CHST6 / zgc:194879 / CHST4* / CHST5* / Q8NCG5* / Q9GZS9* / Q9GZX3* / Q9QUP4* / carbohydrate sulfotransferase 5* / carbohydrate sulfotransferase 6* / carbohydrate sulfotransferase 4*ENSDARG0000006135727
chst2b / carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b / CHST2* / Q80WV3* / Q9Y4C5* / carbohydrate sulfotransferase 2*ENSDARG0000005858524
chst2a / carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2a / CHST2* / Q80WV3* / Q9Y4C5* / carbohydrate sulfotransferase 2*ENSDARG0000007500724
chst7 / carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 / Q9EP78* / Q9NS84* / carbohydrate sulfotransferase 7*ENSDARG0000004434122


Protein motifs (from Interpro)
Interpro ID Name
 IPR000863  Sulfotransferase domain
 IPR016469  Carbohydrate sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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