ENSDARG00000088593


Danio rerio

Features
Gene ID: ENSDARG00000088593
  
Biological name :chst1
  
Synonyms : carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 / chst1
  
Possible biological names infered from orthology : carbohydrate sulfotransferase 1 / O43916 / Q9EQC0
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 14017609
Gene end: 14021111
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000108405
Ensembl peptide - ENSDARP00000105620
NCBI entrez gene - 445124     See in Manteia.
RefSeq - NM_001003518
RefSeq Peptide - NP_001003518
swissprot - A8DZ79
ZFIN ID - ZDB-GENE-040801-21
Ensembl - ENSDARG00000088593
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHST1ENSGALG00000008440Gallus gallus
 CHST1ENSG00000175264Homo sapiens
 Chst1ENSMUSG00000027221Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch73-62b13.1ENSDARG0000009326950
chst3a / carbohydrate (chondroitin 6) sulfotransferase 3a / CHST3* / O88199* / Q7LGC8* / carbohydrate sulfotransferase 3*ENSDARG0000006107036
chst2b / carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b / CHST2* / Q80WV3* / Q9Y4C5* / carbohydrate sulfotransferase 2*ENSDARG0000005858530
chst2a / carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2a / CHST2* / Q80WV3* / Q9Y4C5* / carbohydrate sulfotransferase 2*ENSDARG0000007500729
CHST6 / zgc:194879 / CHST4* / CHST5* / Q8NCG5* / Q9GZS9* / Q9GZX3* / Q9QUP4* / carbohydrate sulfotransferase 5* / carbohydrate sulfotransferase 6* / carbohydrate sulfotransferase 4*ENSDARG0000006135729
chst7 / carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 / Q9EP78* / Q9NS84* / carbohydrate sulfotransferase 7*ENSDARG0000004434126
chst3b / carbohydrate (chondroitin 6) sulfotransferase 3b / CHST3* / Q7LGC8* / carbohydrate sulfotransferase 3*ENSDARG0000011604222


Protein motifs (from Interpro)
Interpro ID Name
 IPR000863  Sulfotransferase domain
 IPR016469  Carbohydrate sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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