ENSGALG00000008440


Gallus gallus

Features
Gene ID: ENSGALG00000008440
  
Biological name :CHST1
  
Synonyms : carbohydrate sulfotransferase 1 / CHST1
  
Possible biological names infered from orthology : O43916 / Q9EQC0
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 23993359
Gene end: 23994615
  
Corresponding Affymetrix probe sets: GgaAffx.5316.1.A1_at (Chicken Array)   GgaAffx.5316.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013735
NCBI entrez gene - 428866     See in Manteia.
RefSeq - XM_015287146
RefSeq - XM_015287147
RefSeq - XM_015287148
swissprot - E1BV91
Ensembl - ENSGALG00000008440
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chst1ENSDARG00000088593Danio rerio
 CHST1ENSG00000175264Homo sapiens
 Chst1ENSMUSG00000027221Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHST3 / carbohydrate sulfotransferase 3 / O88199* / Q7LGC8*ENSGALG0000002405639
CHST4 / carbohydrate sulfotransferase 4 / Q8NCG5*ENSGALG0000000090130
CHST6 / CHST5* / Q9QUP4* / Q9GZS9* / Q9GZX3* / carbohydrate sulfotransferase 6* / carbohydrate sulfotransferase 5*ENSGALG0000000091330
CHST7 / carbohydrate sulfotransferase 7 / Q9EP78* / Q9NS84*ENSGALG0000003137518
CHST2 / carbohydrate sulfotransferase 2 / Q80WV3* / Q9Y4C5*ENSGALG0000003450715


Protein motifs (from Interpro)
Interpro ID Name
 IPR000863  Sulfotransferase domain
 IPR016469  Carbohydrate sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006012 galactose metabolic process IEA
 biological_processGO:0006790 sulfur compound metabolic process IEA
 biological_processGO:0042339 keratan sulfate metabolic process IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity IBA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0045130 keratan sulfotransferase activity IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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