ENSGALG00000000913


Gallus gallus

Features
Gene ID: ENSGALG00000000913
  
Biological name :CHST6
  
Synonyms : CHST6
  
Possible biological names infered from orthology : carbohydrate sulfotransferase 5 / carbohydrate sulfotransferase 6 / CHST5 / Q9GZS9 / Q9GZX3 / Q9QUP4
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 20162333
Gene end: 20168892
  
Corresponding Affymetrix probe sets: Gga.12393.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000064510
Ensembl peptide - ENSGALP00000001340
Ensembl peptide - ENSGALP00000062077
Ensembl peptide - ENSGALP00000063572
NCBI entrez gene - 770257     See in Manteia.
RefSeq - XM_015292618
RefSeq - NM_001282522
RefSeq - XM_015292616
RefSeq - XM_015292617
RefSeq - XM_015292613
RefSeq - XM_015292614
RefSeq - XM_015292615
RefSeq Peptide - NP_001269451
swissprot - E1C5F3
Ensembl - ENSGALG00000000913
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHST6ENSDARG00000061357Danio rerio
 CHST5ENSG00000135702Homo sapiens
 CHST6ENSG00000183196Homo sapiens
 Chst5ENSMUSG00000031952Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHST4 / carbohydrate sulfotransferase 4 / Q8NCG5*ENSGALG0000000090161
CHST1 / carbohydrate sulfotransferase 1 / O43916* / Q9EQC0*ENSGALG0000000844031
CHST3 / carbohydrate sulfotransferase 3 / O88199* / Q7LGC8*ENSGALG0000002405626
CHST7 / carbohydrate sulfotransferase 7 / Q9EP78* / Q9NS84*ENSGALG0000003137522
CHST2 / carbohydrate sulfotransferase 2 / Q80WV3* / Q9Y4C5*ENSGALG0000003450718


Protein motifs (from Interpro)
Interpro ID Name
 IPR000863  Sulfotransferase domain
 IPR016469  Carbohydrate sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0018146 keratan sulfate biosynthetic process IBA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity IBA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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