ENSDARG00000058585


Danio rerio

Features
Gene ID: ENSDARG00000058585
  
Biological name :chst2b
  
Synonyms : carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b / chst2b
  
Possible biological names infered from orthology : carbohydrate sulfotransferase 2 / CHST2 / Q80WV3 / Q9Y4C5
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 5784264
Gene end: 5786759
  
Corresponding Affymetrix probe sets: Dr.16450.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000126440
NCBI entrez gene - 100006249     See in Manteia.
RefSeq - XM_001923569
swissprot - K7DYB2
ZFIN ID - ZDB-GENE-060720-33
Ensembl - ENSDARG00000058585
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHST2ENSGALG00000034507Gallus gallus
 CHST2ENSG00000175040Homo sapiens
 Chst2ENSMUSG00000033350Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chst2a / carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2a / CHST2* / Q80WV3* / Q9Y4C5* / carbohydrate sulfotransferase 2*ENSDARG0000007500775
chst7 / carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 / Q9EP78* / Q9NS84* / carbohydrate sulfotransferase 7*ENSDARG0000004434140
chst1 / carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 / O43916* / Q9EQC0* / carbohydrate sulfotransferase 1*ENSDARG0000008859327
si:ch73-62b13.1ENSDARG0000009326926
CHST6 / zgc:194879 / CHST4* / CHST5* / Q8NCG5* / Q9GZS9* / Q9GZX3* / Q9QUP4* / carbohydrate sulfotransferase 5* / carbohydrate sulfotransferase 6* / carbohydrate sulfotransferase 4*ENSDARG0000006135725
chst3a / carbohydrate (chondroitin 6) sulfotransferase 3a / CHST3* / O88199* / Q7LGC8* / carbohydrate sulfotransferase 3*ENSDARG0000006107022
chst3b / carbohydrate (chondroitin 6) sulfotransferase 3b / CHST3* / Q7LGC8* / carbohydrate sulfotransferase 3*ENSDARG0000011604215


Protein motifs (from Interpro)
Interpro ID Name
 IPR000863  Sulfotransferase domain
 IPR016469  Carbohydrate sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006790 sulfur compound metabolic process IBA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity IBA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr