ENSG00000176108


Homo sapiens

Features
Gene ID: ENSG00000176108
  
Biological name :CHMP6
  
Synonyms : charged multivesicular body protein 6 / CHMP6 / Q96FZ7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: q25.3
Gene start: 80991598
Gene end: 81009517
  
Corresponding Affymetrix probe sets: 218743_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000317468
Ensembl peptide - ENSP00000460389
Ensembl peptide - ENSP00000461098
Ensembl peptide - ENSP00000461238
NCBI entrez gene - 79643     See in Manteia.
OMIM - 610901
RefSeq - XM_005257668
RefSeq - NM_024591
RefSeq Peptide - NP_078867
swissprot - I3L4G8
swissprot - I3L3E4
swissprot - Q96FZ7
swissprot - I3L4A1
Ensembl - ENSG00000176108
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chmp6aENSDARG00000097451Danio rerio
 chmp6bENSDARG00000102024Danio rerio
 CHMP6ENSGALG00000026428Gallus gallus
 Chmp6ENSMUSG00000025371Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005024  Snf7 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000920 cell separation after cytokinesis IMP
 biological_processGO:0006997 nucleus organization IMP
 biological_processGO:0007034 vacuolar transport IEA
 biological_processGO:0007080 mitotic metaphase plate congression IMP
 biological_processGO:0007175 negative regulation of epidermal growth factor-activated receptor activity IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016197 endosomal transport TAS
 biological_processGO:0016236 macroautophagy TAS
 biological_processGO:0019058 viral life cycle TAS
 biological_processGO:0036258 multivesicular body assembly TAS
 biological_processGO:0039702 viral budding via host ESCRT complex IDA
 biological_processGO:1904902 ESCRT III complex assembly NAS
 cellular_componentGO:0000815 ESCRT III complex IDA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0012505 endomembrane system IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0044877 protein-containing complex binding IDA
 molecular_functionGO:0047485 protein N-terminus binding IPI


Pathways (from Reactome)
Pathway description
Budding and maturation of HIV virion
Macroautophagy
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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