ENSG00000176438


Homo sapiens

Features
Gene ID: ENSG00000176438
  
Biological name :SYNE3
  
Synonyms : Q6ZMZ3 / spectrin repeat containing nuclear envelope family member 3 / SYNE3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: -1
Band: q32.13
Gene start: 95407266
Gene end: 95475836
  
Corresponding Affymetrix probe sets: 1553644_at (Human Genome U133 Plus 2.0 Array)   219563_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000334308
Ensembl peptide - ENSP00000450562
Ensembl peptide - ENSP00000450774
Ensembl peptide - ENSP00000452154
NCBI entrez gene - 161176     See in Manteia.
OMIM - 610861
RefSeq - XM_017021057
RefSeq - NM_152592
RefSeq - XM_006720063
RefSeq - XM_011536515
RefSeq - XM_017021056
RefSeq - XM_005267377
RefSeq Peptide - NP_689805
swissprot - Q6ZMZ3
swissprot - G3V533
Ensembl - ENSG00000176438
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syne3ENSDARG00000023237Danio rerio
 SYNE3ENSGALG00000011076Gallus gallus
 Syne3ENSMUSG00000054150Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002017  Spectrin repeat
 IPR012315  KASH domain
 IPR018159  Spectrin/alpha-actinin
 IPR030267  Nesprin-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IMP
 biological_processGO:0008360 regulation of cell shape IMP
 biological_processGO:0090150 establishment of protein localization to membrane IDA
 biological_processGO:0090286 cytoskeletal anchoring at nuclear membrane IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005640 nuclear outer membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005791 rough endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031965 nuclear membrane IDA
 cellular_componentGO:0034993 meiotic nuclear membrane microtubule tethering complex IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008092 cytoskeletal protein binding IEA
 molecular_functionGO:0051015 actin filament binding IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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