ENSGALG00000011076


Gallus gallus

Features
Gene ID: ENSGALG00000011076
  
Biological name :SYNE3
  
Synonyms : spectrin repeat containing nuclear envelope family member 3 / SYNE3
  
Possible biological names infered from orthology : Nesprin-3 / Q4FZC9 / Q6ZMZ3
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 46084881
Gene end: 46114497
  
Corresponding Affymetrix probe sets: GgaAffx.7016.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018019
NCBI entrez gene - 423439     See in Manteia.
RefSeq - XM_004941903
RefSeq - XM_421348
RefSeq - XM_004941905
RefSeq - XM_015287776
swissprot - E1C8I6
Ensembl - ENSGALG00000011076
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syne3ENSDARG00000023237Danio rerio
 SYNE3ENSG00000176438Homo sapiens
 Syne3ENSMUSG00000054150Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002017  Spectrin repeat
 IPR012315  KASH domain
 IPR018159  Spectrin/alpha-actinin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0008360 regulation of cell shape IEA
 biological_processGO:0090150 establishment of protein localization to membrane IEA
 biological_processGO:0090286 cytoskeletal anchoring at nuclear membrane IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005640 nuclear outer membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0034993 meiotic nuclear membrane microtubule tethering complex IEA
 molecular_functionGO:0008092 cytoskeletal protein binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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