ENSMUSG00000054150


Mus musculus

Features
Gene ID: ENSMUSG00000054150
  
Biological name :Syne3
  
Synonyms : Nesprin-3 / Q4FZC9 / Syne3
  
Possible biological names infered from orthology : Q6ZMZ3 / spectrin repeat containing nuclear envelope family member 3
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: E
Gene start: 104929933
Gene end: 105009809
  
Corresponding Affymetrix probe sets: 10402490 (MoGene1.0st)   1440402_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000065771
Ensembl peptide - ENSMUSP00000093090
Ensembl peptide - ENSMUSP00000105553
NCBI entrez gene - 212073     See in Manteia.
MGI - MGI:2442408
RefSeq - XM_006515654
RefSeq - NM_001042699
RefSeq - NM_172500
RefSeq - XM_006515652
RefSeq - XM_006515653
RefSeq Peptide - NP_001036164
RefSeq Peptide - NP_766088
swissprot - Q4FZC9
Ensembl - ENSMUSG00000054150
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syne3ENSDARG00000023237Danio rerio
 SYNE3ENSGALG00000011076Gallus gallus
 SYNE3ENSG00000176438Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002017  Spectrin repeat
 IPR012315  KASH domain
 IPR018159  Spectrin/alpha-actinin
 IPR030267  Nesprin-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization ISO
 biological_processGO:0008360 regulation of cell shape ISO
 biological_processGO:0090150 establishment of protein localization to membrane ISS
 biological_processGO:0090286 cytoskeletal anchoring at nuclear membrane ISO
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope ISS
 cellular_componentGO:0005640 nuclear outer membrane IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005791 rough endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031965 nuclear membrane ISO
 cellular_componentGO:0034993 meiotic nuclear membrane microtubule tethering complex ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008092 cytoskeletal protein binding IEA
 molecular_functionGO:0051015 actin filament binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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