ENSG00000177192


Homo sapiens

Features
Gene ID: ENSG00000177192
  
Biological name :PUS1
  
Synonyms : pseudouridylate synthase 1 / PUS1 / Q9Y606
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q24.33
Gene start: 131929200
Gene end: 131945896
  
Corresponding Affymetrix probe sets: 218670_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000440326
Ensembl peptide - ENSP00000440179
Ensembl peptide - ENSP00000443969
Ensembl peptide - ENSP00000445819
Ensembl peptide - ENSP00000324726
Ensembl peptide - ENSP00000365837
Ensembl peptide - ENSP00000392451
Ensembl peptide - ENSP00000409705
Ensembl peptide - ENSP00000438948
NCBI entrez gene - 80324     See in Manteia.
OMIM - 608109
RefSeq - XM_011538769
RefSeq - NM_001002019
RefSeq - NM_001002020
RefSeq - NM_025215
RefSeq - XM_011538768
RefSeq Peptide - NP_001002019
RefSeq Peptide - NP_001002020
RefSeq Peptide - NP_079491
swissprot - G8JLB3
swissprot - Q9Y606
swissprot - E5KMT5
swissprot - E5KMT6
swissprot - F5GXL3
swissprot - F5GY32
swissprot - F5H1B2
swissprot - F5H168
swissprot - F5H1S9
swissprot - F8W9U5
Ensembl - ENSG00000177192
  
Related genetic diseases (OMIM): 600462 - Myopathy, lactic acidosis, and sideroblastic anemia 1, 600462
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pus1ENSDARG00000045562Danio rerio
 PUS1ENSGALG00000002354Gallus gallus
 Pus1ENSMUSG00000029507Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001406  Pseudouridine synthase I, TruA
 IPR020095  Pseudouridine synthase I, TruA, C-terminal
 IPR020097  Pseudouridine synthase I, TruA, alpha/beta domain
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 biological_processGO:0070902 mitochondrial tRNA pseudouridine synthesis TAS
 biological_processGO:1990481 mRNA pseudouridine synthesis IBA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004730 pseudouridylate synthase activity NAS
 molecular_functionGO:0009982 pseudouridine synthase activity IEA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000343 Long philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
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 HP:0000823 Delayed puberty 
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 HP:0000980 Pallor 
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 HP:0001249 Mental retardation 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001903 Anemia 
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 HP:0001924 Sideroblastic anemia 
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 HP:0001931 Hypochromic anemia 
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 HP:0001935 Microcytic anemia 
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002808 Kyphosis 
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003198 Myopathy 
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 HP:0003281 Increased serum ferritin 
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 HP:0003323 Muscle weakness, progressive 
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 HP:0003457 Abnormal EMG findings "Abnormal results of investigations using electromyography (EMG)." [HPO:curators]
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 HP:0003546 Exercise intolerance 
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 HP:0003688 Muscle biopsy shows decreased activity of cytochrome C oxidase 
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 HP:0003737 Mitochondrial myopathy 
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 HP:0009055 Generalized limb muscle atrophy "Generalized atrophy affecting muscles of the limbs." [HPO:curators]
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 HP:0009743 Distichiasis "Distichiasis refers to ouble rows of eyelashes." [HPO:curators]
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 HP:0012132 Erythroid hyperplasia "Increased count of erythroid precursor cells, that is, `erythroid lineage cells` (CL:0000764) in the bone marrow." [DDD:akelly]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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