ENSGALG00000002354


Gallus gallus

Features
Gene ID: ENSGALG00000002354
  
Biological name :PUS1
  
Synonyms : pseudouridylate synthase 1 / PUS1
  
Possible biological names infered from orthology : Mus musculus pseudouridine synthase 1 (Pus1), transcript variant 6, mRNA. / Q9WU56 / Q9Y606
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 2631283
Gene end: 2634476
  
Corresponding Affymetrix probe sets: Gga.15242.1.S1_at (Chicken Array)   GgaAffx.20235.1.S1_at (Chicken Array)   GgaAffx.20235.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003706
NCBI entrez gene - 416799     See in Manteia.
RefSeq - XM_004945515
RefSeq - XM_415090
swissprot - F1NZ90
Ensembl - ENSGALG00000002354
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pus1ENSDARG00000045562Danio rerio
 PUS1ENSG00000177192Homo sapiens
 Pus1ENSMUSG00000029507Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001406  Pseudouridine synthase I, TruA
 IPR020095  Pseudouridine synthase I, TruA, C-terminal
 IPR020097  Pseudouridine synthase I, TruA, alpha/beta domain
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 biological_processGO:1990481 mRNA pseudouridine synthesis IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IBA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr