ENSG00000178177


Homo sapiens

Features
Gene ID: ENSG00000178177
  
Biological name :LCORL
  
Synonyms : LCORL / ligand dependent nuclear receptor corepressor like / Q8N3X6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: -1
Band: p15.31
Gene start: 17841199
Gene end: 18021876
  
Corresponding Affymetrix probe sets: 232293_at (Human Genome U133 Plus 2.0 Array)   235970_at (Human Genome U133 Plus 2.0 Array)   240592_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000371659
Ensembl peptide - ENSP00000317566
Ensembl peptide - ENSP00000371661
Ensembl peptide - ENSP00000490873
Ensembl peptide - ENSP00000490600
Ensembl peptide - ENSP00000423489
NCBI entrez gene - 254251     See in Manteia.
OMIM - 611799
RefSeq - XM_017007965
RefSeq - XM_011513822
RefSeq - XM_011513823
RefSeq - XM_011513825
RefSeq - XM_011513826
RefSeq - XM_017007961
RefSeq - XM_017007962
RefSeq - XM_017007964
RefSeq - NM_001166139
RefSeq - NM_153686
RefSeq - XM_011513821
RefSeq Peptide - NP_001159611
RefSeq Peptide - NP_710153
swissprot - A0A1B0GWC6
swissprot - D6RA10
swissprot - A0A1B0GVP4
swissprot - Q8N3X6
swissprot - C9JI46
Ensembl - ENSG00000178177
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LCORLENSGALG00000014421Gallus gallus
 LcorlENSMUSG00000015882Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LCOR / Q96JN0 / ligand dependent nuclear receptor corepressorENSG0000019623323


Protein motifs (from Interpro)
Interpro ID Name
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily
 IPR028104  Protein of unknown function DUF4553
 IPR036388  Winged helix-like DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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