ENSG00000196233


Homo sapiens

Features
Gene ID: ENSG00000196233
  
Biological name :LCOR
  
Synonyms : LCOR / ligand dependent nuclear receptor corepressor / Q96JN0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q24.1
Gene start: 96832282
Gene end: 96995959
  
Corresponding Affymetrix probe sets: 216393_at (Human Genome U133 Plus 2.0 Array)   219601_s_at (Human Genome U133 Plus 2.0 Array)   226520_at (Human Genome U133 Plus 2.0 Array)   226892_at (Human Genome U133 Plus 2.0 Array)   228454_at (Human Genome U133 Plus 2.0 Array)   238842_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000443431
Ensembl peptide - ENSP00000360144
Ensembl peptide - ENSP00000490116
Ensembl peptide - ENSP00000286067
Ensembl peptide - ENSP00000348298
Ensembl peptide - ENSP00000360138
NCBI entrez gene - 84458     See in Manteia.
OMIM - 607698
RefSeq - XM_017016788
RefSeq - NM_001170765
RefSeq - NM_001170766
RefSeq - NM_015652
RefSeq - NM_032440
RefSeq - XM_006718033
RefSeq - XM_011540277
RefSeq - XM_017016784
RefSeq - XM_017016785
RefSeq - XM_017016786
RefSeq - XM_017016787
RefSeq Peptide - NP_001164236
RefSeq Peptide - NP_001164237
RefSeq Peptide - NP_056467
RefSeq Peptide - NP_115816
swissprot - Q96JN0
swissprot - A0A1P0AZG4
Ensembl - ENSG00000196233
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lcorENSDARG00000100908Danio rerio
 LcorENSMUSG00000025019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LCORL / Q8N3X6 / ligand dependent nuclear receptor corepressor likeENSG0000017817732


Protein motifs (from Interpro)
Interpro ID Name
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily
 IPR028104  Protein of unknown function DUF4553


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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