ENSMUSG00000025019


Mus musculus

Features
Gene ID: ENSMUSG00000025019
  
Biological name :Lcor
  
Synonyms : Lcor / ligand dependent nuclear receptor corepressor / Q6ZPI3
  
Possible biological names infered from orthology : Q96JN0
  
Species: Mus musculus
  
Chr. number: 19
Strand: 1
Band: C3
Gene start: 41482645
Gene end: 41562246
  
Corresponding Affymetrix probe sets: 10463140 (MoGene1.0st)   1429633_at (Mouse Genome 430 2.0 Array)   1443779_s_at (Mouse Genome 430 2.0 Array)   1455121_at (Mouse Genome 430 2.0 Array)   1459928_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000067603
Ensembl peptide - ENSMUSP00000126441
NCBI entrez gene - 212391     See in Manteia.
MGI - MGI:2443930
RefSeq - XM_011247216
RefSeq - NM_172154
RefSeq - XM_006526849
RefSeq - XM_006526850
RefSeq - XM_011247215
RefSeq - XM_006526848
RefSeq Peptide - NP_742166
swissprot - Q6ZPI3
swissprot - A4FTY7
Ensembl - ENSMUSG00000025019
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lcorENSDARG00000100908Danio rerio
 LCORENSG00000196233Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lcorl / Q3U285 / Ligand-dependent nuclear receptor corepressor-like protein / Q8N3X6* / ligand dependent nuclear receptor corepressor like*ENSMUSG0000001588232


Protein motifs (from Interpro)
Interpro ID Name
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006366 transcription by RNA polymerase II IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0008134 transcription factor binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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