ENSMUSG00000015882


Mus musculus

Features
Gene ID: ENSMUSG00000015882
  
Biological name :Lcorl
  
Synonyms : Lcorl / Ligand-dependent nuclear receptor corepressor-like protein / Q3U285
  
Possible biological names infered from orthology : ligand dependent nuclear receptor corepressor like / Q8N3X6
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: B3
Gene start: 45697181
Gene end: 45857615
  
Corresponding Affymetrix probe sets: 10529923 (MoGene1.0st)   1439272_at (Mouse Genome 430 2.0 Array)   1455260_at (Mouse Genome 430 2.0 Array)   1455686_at (Mouse Genome 430 2.0 Array)   1456712_at (Mouse Genome 430 2.0 Array)   1458352_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000084408
Ensembl peptide - ENSMUSP00000141174
Ensembl peptide - ENSMUSP00000140503
Ensembl peptide - ENSMUSP00000139996
Ensembl peptide - ENSMUSP00000139466
Ensembl peptide - ENSMUSP00000112416
Ensembl peptide - ENSMUSP00000016026
Ensembl peptide - ENSMUSP00000042677
NCBI entrez gene - 209707     See in Manteia.
MGI - MGI:2651932
RefSeq - XM_011240709
RefSeq - NM_001163073
RefSeq - NM_172153
RefSeq - NM_178142
RefSeq - XM_006503818
RefSeq - XM_006503825
RefSeq Peptide - NP_001156545
RefSeq Peptide - NP_742165
RefSeq Peptide - NP_835278
swissprot - A0A087WQ10
swissprot - A0A087WNR9
swissprot - A0A0H2UH31
swissprot - A0A087WST0
swissprot - E9PXY2
swissprot - Q3U285
Ensembl - ENSMUSG00000015882
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LCORLENSGALG00000014421Gallus gallus
 LCORLENSG00000178177Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lcor / Q6ZPI3 / ligand dependent nuclear receptor corepressor / Q96JN0*ENSMUSG0000002501923


Protein motifs (from Interpro)
Interpro ID Name
 IPR007889  DNA binding HTH domain, Psq-type
 IPR009057  Homeobox-like domain superfamily
 IPR036388  Winged helix-like DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006366 transcription by RNA polymerase II IDA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr