ENSG00000179085


Homo sapiens

Features
Gene ID: ENSG00000179085
  
Biological name :DPM3
  
Synonyms : dolichyl-phosphate mannosyltransferase subunit 3 / DPM3 / Q9P2X0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q22
Gene start: 155139891
Gene end: 155140595
  
Corresponding Affymetrix probe sets: 219373_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000357385
Ensembl peptide - ENSP00000344338
Ensembl peptide - ENSP00000357384
NCBI entrez gene - 54344     See in Manteia.
OMIM - 605951
RefSeq - XM_017001498
RefSeq - NM_018973
RefSeq - NM_153741
RefSeq Peptide - NP_061846
RefSeq Peptide - NP_714963
swissprot - Q9P2X0
swissprot - A0A140VJI4
Ensembl - ENSG00000179085
  
Related genetic diseases (OMIM): 612937 - Congenital disorder of glycosylation, type Io, 612937
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dpm3ENSDARG00000058650Danio rerio
 Dpm3ENSMUSG00000042737Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013174  Dolichol-phosphate mannosyltransferase subunit 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process NAS
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006506 GPI anchor biosynthetic process TAS
 biological_processGO:0018279 protein N-linked glycosylation via asparagine TAS
 biological_processGO:0018406 protein C-linked glycosylation via 2"-alpha-mannosyl-L-tryptophan TAS
 biological_processGO:0031647 regulation of protein stability IPI
 biological_processGO:0035268 protein mannosylation TAS
 biological_processGO:0035269 protein O-linked mannosylation TAS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IDA
 cellular_componentGO:0031501 mannosyltransferase complex TAS
 cellular_componentGO:0033185 dolichol-phosphate-mannose synthase complex IDA
 molecular_functionGO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Synthesis of dolichyl-phosphate mannose
Defective DPM3 causes DPM3-CDG (CDG-1o)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001315 Reduced reflexes 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001644 Dilated cardiomyopathy 
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0002187 Mental retardation, profound "Severe mental retardation is defined as an intelligence quotient (IQ) below 20." [HPO:curators]
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 HP:0002401 Stroke-like episodes 
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 HP:0002515 Waddling gait 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003557 Increased variability in muscle fiber size "An abnormally high degree of muscle fiber size variation. This phenotypic feature can be observed upon muscle biopsy." [HPO:curators]
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 HP:0003560 Muscular dystrophy "The term dystrophy means abnormal growth. However, muscular dystrophy is used to describe primary myopathies with a genetic basis and a progressive course characterized by progressive skeletal muscle weakness, defects in muscle proteins, and the apoptosis of muscle cells." [HPO:curators]
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 HP:0003642 Abnormal isoelectric focusing of serum transferrin (type 1 pattern) 
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 HP:0003749 Pelvic girdle muscle weakness "Weakness of the muscles of the pelvic girdle (also known as the hip girdle), that is, lack of strength of the muscles around the pelvis." [HPO:curators]
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 HP:0003805 Rimmed vacuoles 
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 HP:0008331 Elevated creatine kinase after exercise 
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 HP:0008981 Muscular hypertrophy, esp calf muscles "Muscle hypertrophy primarily affecting the calf muscles." [HPO:curators]
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 HP:0012363 Decreased sialylation of O-linked protein glycosylation "An reduced addition of sialic acids to O-linked glycans." [HPO:probinson]
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 HP:0100749 Chest pain 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000136908 DPM2 / O94777 / dolichyl-phosphate mannosyltransferase subunit 2, regulatory  / complex
 ENSG00000000419 DPM1 / O60762 / dolichyl-phosphate mannosyltransferase subunit 1, catalytic  / complex






 

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