ENSG00000179134


Homo sapiens

Features
Gene ID: ENSG00000179134
  
Biological name :SAMD4B
  
Synonyms : Q5PRF9 / SAMD4B / sterile alpha motif domain containing 4B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.2
Gene start: 39342396
Gene end: 39385710
  
Corresponding Affymetrix probe sets: 220457_at (Human Genome U133 Plus 2.0 Array)   226714_at (Human Genome U133 Plus 2.0 Array)   227511_at (Human Genome U133 Plus 2.0 Array)   229871_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000471509
Ensembl peptide - ENSP00000482861
Ensembl peptide - ENSP00000484229
Ensembl peptide - ENSP00000317224
Ensembl peptide - ENSP00000468891
Ensembl peptide - ENSP00000469404
Ensembl peptide - ENSP00000469620
Ensembl peptide - ENSP00000470237
Ensembl peptide - ENSP00000470821
NCBI entrez gene - 55095     See in Manteia.
RefSeq - XM_017026923
RefSeq - XM_011527057
RefSeq - XM_011527060
RefSeq - XM_011527061
RefSeq - XM_011527062
RefSeq - XM_011527063
RefSeq - XM_011527064
RefSeq - XM_017026918
RefSeq - XM_017026919
RefSeq - XM_017026920
RefSeq - XM_017026921
RefSeq - XM_017026922
RefSeq - NM_001303614
RefSeq - NM_018028
RefSeq Peptide - NP_001290543
RefSeq Peptide - NP_060498
swissprot - M0QXV2
swissprot - M0QY61
swissprot - M0QZ22
swissprot - A0A087WZT0
swissprot - M0R0X3
swissprot - Q5PRF9
swissprot - A0A024R0N7
swissprot - M0QZW7
swissprot - M0QX45
Ensembl - ENSG00000179134
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch1073-111c8.3ENSDARG00000086735Danio rerio
 SAMD4BENSGALG00000042804Gallus gallus
 Samd4bENSMUSG00000109336Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9UPU9 / SAMD4A / sterile alpha motif domain containing 4AENSG0000002057762


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR037093  Smaug, PHAT domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000289 nuclear-transcribed mRNA poly(A) tail shortening IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0017148 negative regulation of translation IEA
 biological_processGO:0043488 regulation of mRNA stability IEA
 cellular_componentGO:0000932 P-body IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030371 translation repressor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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