ENSMUSG00000109336


Mus musculus

Features
Gene ID: ENSMUSG00000109336
  
Biological name :Samd4b
  
Synonyms : Samd4b / sterile alpha motif domain containing 4B
  
Possible biological names infered from orthology : Q5PRF9
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: B1
Gene start: 28399522
Gene end: 28598144
  
Corresponding Affymetrix probe sets: 10561461 (MoGene1.0st)   1460034_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000146657
Ensembl peptide - ENSMUSP00000147037
Ensembl peptide - ENSMUSP00000146984
Ensembl peptide - ENSMUSP00000040486
NCBI entrez gene - 233033     See in Manteia.
MGI - MGI:2448542
RefSeq - NM_175021
RefSeq Peptide - NP_778186
swissprot - A0A140LIW4
swissprot - A0A140LI35
swissprot - G5E8A7
Ensembl - ENSMUSG00000109336
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch1073-111c8.3ENSDARG00000086735Danio rerio
 SAMD4BENSGALG00000042804Gallus gallus
 Q5PRF9ENSG00000179134Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
1 / Samd4 / Q8CBY1 / Q9UPU9* / SAMD4A* / sterile alpha motif domain containing 4A*ENSMUSG0000002183862


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR037093  Smaug, PHAT domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0017148 negative regulation of translation IEA
 biological_processGO:0043488 regulation of mRNA stability IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030371 translation repressor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr