ENSG00000182973


Homo sapiens

Features
Gene ID: ENSG00000182973
  
Biological name :CNOT10
  
Synonyms : CCR4-NOT transcription complex subunit 10 / CNOT10 / Q9H9A5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p22.3
Gene start: 32685145
Gene end: 32773875
  
Corresponding Affymetrix probe sets: 223219_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000402795
Ensembl peptide - ENSP00000402979
Ensembl peptide - ENSP00000329376
Ensembl peptide - ENSP00000330060
Ensembl peptide - ENSP00000392312
Ensembl peptide - ENSP00000395385
Ensembl peptide - ENSP00000399862
NCBI entrez gene - 25904     See in Manteia.
RefSeq - XM_017006112
RefSeq - NM_015442
RefSeq - XM_006713084
RefSeq - XM_006713085
RefSeq - XM_011533566
RefSeq - XM_011533567
RefSeq - XM_017006109
RefSeq - XM_017006110
RefSeq - XM_017006111
RefSeq - NM_001256741
RefSeq - NM_001256742
RefSeq Peptide - NP_056257
RefSeq Peptide - NP_001243670
RefSeq Peptide - NP_001243671
swissprot - H7BZZ7
swissprot - E9PCN5
swissprot - Q9H9A5
swissprot - H7C0K1
swissprot - H7C1X9
Ensembl - ENSG00000182973
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cnot10ENSDARG00000058528Danio rerio
 CNOT10ENSGALG00000011494Gallus gallus
 Cnot10ENSMUSG00000056167Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000289 nuclear-transcribed mRNA poly(A) tail shortening TAS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest TAS
 biological_processGO:0031047 gene silencing by RNA IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0030014 CCR4-NOT complex IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Deadenylation of mRNA
TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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