ENSMUSG00000056167


Mus musculus

Features
Gene ID: ENSMUSG00000056167
  
Biological name :Cnot10
  
Synonyms : CCR4-NOT transcription complex subunit 10 / Cnot10 / Q8BH15
  
Possible biological names infered from orthology : Q9H9A5
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: F3
Gene start: 114585878
Gene end: 114640184
  
Corresponding Affymetrix probe sets: 10597432 (MoGene1.0st)   1433882_at (Mouse Genome 430 2.0 Array)   1453654_at (Mouse Genome 430 2.0 Array)   1459756_at (Mouse Genome 430 2.0 Array)   1459757_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000064840
Ensembl peptide - ENSMUSP00000149867
Ensembl peptide - ENSMUSP00000149745
Ensembl peptide - ENSMUSP00000149024
Ensembl peptide - ENSMUSP00000148963
NCBI entrez gene - 78893     See in Manteia.
MGI - MGI:1926143
RefSeq - XM_017313699
RefSeq - NM_153585
RefSeq - XM_006512399
RefSeq Peptide - NP_705813
swissprot - A0A1L1SS47
swissprot - A0A1L1SSE2
swissprot - Q8BH15
swissprot - A0A1L1SQF2
swissprot - A0A1L1SQA7
Ensembl - ENSMUSG00000056167
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cnot10ENSDARG00000058528Danio rerio
 CNOT10ENSGALG00000011494Gallus gallus
 CNOT10ENSG00000182973Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0031047 gene silencing by RNA IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0030014 CCR4-NOT complex IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr