ENSGALG00000011494


Gallus gallus

Features
Gene ID: ENSGALG00000011494
  
Biological name :CNOT10
  
Synonyms : CCR4-NOT transcription complex subunit 10 / CNOT10 / Q5ZIW2
  
Possible biological names infered from orthology : Q8BH15 / Q9H9A5
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 40640429
Gene end: 40669624
  
Corresponding Affymetrix probe sets: Gga.11434.1.S1_at (Chicken Array)   Gga.7409.1.S1_s_at (Chicken Array)   GgaAffx.20366.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055221
Ensembl peptide - ENSGALP00000018708
NCBI entrez gene - 420669     See in Manteia.
RefSeq - NM_001006364
RefSeq Peptide - NP_001006364
swissprot - Q5ZIW2
swissprot - A0A1D5PQQ4
Ensembl - ENSGALG00000011494
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cnot10ENSDARG00000058528Danio rerio
 CNOT10ENSG00000182973Homo sapiens
 Cnot10ENSMUSG00000056167Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0031047 gene silencing by RNA IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0030014 CCR4-NOT complex IEA


Pathways (from Reactome)
Pathway description
Deadenylation of mRNA
TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr