ENSG00000184402


Homo sapiens

Features
Gene ID: ENSG00000184402
  
Biological name :SS18L1
  
Synonyms : O75177 / SS18L1 / SS18L1, nBAF chromatin remodeling complex subunit
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.33
Gene start: 62143795
Gene end: 62182484
  
Corresponding Affymetrix probe sets: 213140_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000333012
Ensembl peptide - ENSP00000359885
Ensembl peptide - ENSP00000398634
Ensembl peptide - ENSP00000434451
NCBI entrez gene - 26039     See in Manteia.
OMIM - 606472
RefSeq - XM_017027784
RefSeq - NM_001301778
RefSeq - NM_198935
RefSeq - XM_005260389
RefSeq - XM_005260391
RefSeq - XM_011528764
RefSeq - XM_011528767
RefSeq Peptide - NP_001288707
RefSeq Peptide - NP_945173
swissprot - H0YDW4
swissprot - O75177
swissprot - Q9BR54
Ensembl - ENSG00000184402
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8BW22ENSMUSG00000039086Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SS18 / Q15532 / SS18, nBAF chromatin remodeling complex subunitENSG0000014138061
Q9UHA2 / SS18L2 / SS18 like 2ENSG0000000832411


Protein motifs (from Interpro)
Interpro ID Name
 IPR007726  SS18 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0016358 dendrite development IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISS
 biological_processGO:0050773 regulation of dendrite development IEA
 biological_processGO:0050775 positive regulation of dendrite morphogenesis IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0000776 kinetochore IDA
 cellular_componentGO:0000777 condensed chromosome kinetochore IEA
 cellular_componentGO:0000780 condensed nuclear chromosome, centromeric region IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0071565 nBAF complex IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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