ENSG00000189241


Homo sapiens

Features
Gene ID: ENSG00000189241
  
Biological name :TSPYL1
  
Synonyms : Q9H0U9 / TSPYL1 / TSPY like 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q22.1
Gene start: 116276578
Gene end: 116279903
  
Corresponding Affymetrix probe sets: 1560647_at (Human Genome U133 Plus 2.0 Array)   1560648_s_at (Human Genome U133 Plus 2.0 Array)   221493_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000357597
NCBI entrez gene - 7259     See in Manteia.
OMIM - 604714
RefSeq - NM_003309
RefSeq Peptide - NP_003300
swissprot - Q9H0U9
Ensembl - ENSG00000189241
  
Related genetic diseases (OMIM): 608800 - Sudden infant death with dysgenesis of the testes syndrome, 608800
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tspyENSDARG00000005015Danio rerio
 O88852ENSMUSG00000047514Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8N831 / TSPYL6 / TSPY like 6ENSG0000017802159
Q9UJ04 / TSPYL4 / TSPY like 4ENSG0000018718953
Q86VY4 / TSPYL5 / TSPY like 5ENSG0000018054338
Q9H2G4 / TSPYL2 / TSPY like 2ENSG0000018420534
TSPY1 / Q01534 / testis specific protein, Y-linked 1ENSG0000025899225
TSPY3 / P0CV98 / testis specific protein, Y-linked 3ENSG0000022892722
TSPY2 / A6NKD2 / testis specific protein, Y-linked 2ENSG0000016875722
TSPY10 / testis specific protein, Y-linked 10ENSG0000023642422
TSPY4 / P0CV99 / P0CW01 / testis specific protein, Y-linked 4ENSG0000023380322
TSPY8 / P0CW00 / testis specific protein, Y-linked 8ENSG0000022954922
SET / Q01105 / SET nuclear proto-oncogeneENSG0000011933521
P0DME0 / SETSIP / SET-like proteinENSG0000023066720


Protein motifs (from Interpro)
Interpro ID Name
 IPR002164  Nucleosome assembly protein (NAP)
 IPR037231  NAP-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0019899 enzyme binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000033 Ambiguous genitalia, male 
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 HP:0000046 Scrotal hypoplasia 
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 HP:0000062 Ambiguous genitalia 
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 HP:0000478 Abnormality of the eyes "Any abnormality of the `eyes` (FMA:54448), including location, spacing, and intraocular abnormalities." [HPO:curators]
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 HP:0000602 Ophthalmoplegia 
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 HP:0001265 Hyporeflexia 
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 HP:0001308 Tongue fasciculations 
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001510 Growth retardation 
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 HP:0001522 Death in infancy 
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 HP:0001608 Abnormality of the voice "Any abnormality of the voice." [HPO:curators]
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 HP:0001662 Bradycardia 
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 HP:0001695 Cardiac arrest 
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 HP:0001939 Metabolism abnormality 
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 HP:0002020 Gastroesophageal reflux 
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 HP:0002045 Hypothermia 
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 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
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 HP:0002459 Dysautonomia 
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 HP:0006543 Cardiorespiratory arrest 
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 HP:0008708 Partial development of the penile shaft 
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 HP:0008715 Testicular dysgenesis 
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 HP:0008733 Dysplastic testes 
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 HP:0008736 Hypoplasia of penis 
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 HP:0008872 Feeding problems in infancy 
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 HP:0010307 Stridor "Stridor is a high pitched sound resulting from turbulent air flow in the upper airway." [HPO:curators]
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 HP:0010535 Sleep apnea "An intermittent cessation of airflow at the mouth and nose during sleep. Apneas of at least 10 seconds are considered important, but persons with sleep apnea may have apneas of 20 seconds to up to 2 or 3 minutes. Patients may have up to 15 events per hour of sleep." [HPO:curators]
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 HP:0025425 Laryngospasm "A spasm (involuntary contraction) of the vocal cords that can make it difficult to speak or breathe." []
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 HP:0025428 Bronchospasm "A spasm (sudden, involuntary constriction) of the bronchioles." []
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 HP:0025431 Staccato cry "A type of cry that is abnormal because it is consists of unusually shortened and detached vocalizations." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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