ENSG00000196365


Homo sapiens

Features
Gene ID: ENSG00000196365
  
Biological name :LONP1
  
Synonyms : LONP1 / lon peptidase 1, mitochondrial / P36776
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: p13.3
Gene start: 5691834
Gene end: 5720572
  
Corresponding Affymetrix probe sets: 209017_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000467808
Ensembl peptide - ENSP00000468379
Ensembl peptide - ENSP00000468385
Ensembl peptide - ENSP00000468541
Ensembl peptide - ENSP00000353826
Ensembl peptide - ENSP00000441523
Ensembl peptide - ENSP00000465139
Ensembl peptide - ENSP00000465585
Ensembl peptide - ENSP00000468083
Ensembl peptide - ENSP00000468114
NCBI entrez gene - 9361     See in Manteia.
OMIM - 605490
RefSeq - NM_004793
RefSeq - NM_001276479
RefSeq - NM_001276480
RefSeq Peptide - NP_004784
RefSeq Peptide - NP_001263409
RefSeq Peptide - NP_001263408
swissprot - P36776
swissprot - K7EJE8
swissprot - K7EKE6
swissprot - K7EQF8
swissprot - K7ER27
swissprot - K7ER56
swissprot - K7ERR6
swissprot - K7ERS1
Ensembl - ENSG00000196365
  
Related genetic diseases (OMIM): 600373 - CODAS syndrome, 600373
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lonp1ENSDARG00000102765Danio rerio
 LONP1ENSGALG00000040492Gallus gallus
 Lonp1ENSMUSG00000041168Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LONP2 / Q86WA8 / lon peptidase 2, peroxisomalENSG0000010291030


Protein motifs (from Interpro)
Interpro ID Name
 IPR003111  Lon, substrate-binding domain
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR004815  Lon protease, bacterial/eukaryotic-type
 IPR008268  Peptidase S16, active site
 IPR008269  Peptidase S16, Lon proteolytic domain
 IPR014721  Ribosomal protein S5 domain 2-type fold, subgroup
 IPR015947  PUA-like superfamily
 IPR020568  Ribosomal protein S5 domain 2-type fold
 IPR027065  Lon protease
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR027503  Lon protease homologue, chloroplastic/mitochondrial


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000002 mitochondrial genome maintenance NAS
 biological_processGO:0001666 response to hypoxia IEP
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEA
 biological_processGO:0007005 mitochondrion organization IMP
 biological_processGO:0007568 aging IEA
 biological_processGO:0009725 response to hormone IEA
 biological_processGO:0010044 response to aluminum ion IEA
 biological_processGO:0030163 protein catabolic process IEA
 biological_processGO:0032042 mitochondrial DNA metabolic process NAS
 biological_processGO:0034599 cellular response to oxidative stress IEA
 biological_processGO:0051131 chaperone-mediated protein complex assembly IEA
 biological_processGO:0051260 protein homooligomerization IDA
 biological_processGO:0051603 proteolysis involved in cellular protein catabolic process IDA
 biological_processGO:0070407 oxidation-dependent protein catabolic process IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0042645 mitochondrial nucleoid IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0001018 mitochondrial promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003697 single-stranded DNA binding IEA
 molecular_functionGO:0003727 single-stranded RNA binding IDA
 molecular_functionGO:0004176 ATP-dependent peptidase activity IEA
 molecular_functionGO:0004252 serine-type endopeptidase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008236 serine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0043531 ADP binding IDA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0051880 G-quadruplex DNA binding IDA
 molecular_functionGO:0070182 DNA polymerase binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000072 Hydroureter "The distention of the ureter with urine." [HPO:curators]
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 HP:0000143 Rectovaginal fistula "The presence of a fistula between the rectum and the vagina." [HPO:curators]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000396 Overfolded helices "A condition in which the upper edge of the ear is folded over to a greater degree than normal." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000519 Congenital cataract "A congenital `cataract` (HP:0000518)." [HPO:probinson]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000682 Abnormality of dental enamel "An abnormality of the dental enamel, which is the external layer of the teeth, being a highly mineralized substance consisting primarily of hydroxylapatite." [HPO:curators]
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 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
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 HP:0001156 Brachydactyly 
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 HP:0001216 Delayed maturation/delayed ossification of carpal bones 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001374 Congenital hip dislocation 
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 HP:0001539 Omphalocele 
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 HP:0001561 Polyhydramnios 
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 HP:0001600 Abnormality of the larynx 
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 HP:0001604 Vocal cord paresis 
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0002023 Anal atresia "Congenital absence of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002682 Broad skull 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002857 Genu valgum 
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 HP:0003177 Square iliac bones 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003311 Hypoplastic odontoid process 
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 HP:0003417 Coronal cleft vertebrae 
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 HP:0004122 Midline defect of the nose "This term groups together three conditions that presumably represent different degrees of severity of a midline defect of the nose or nasal tip." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005242 Extrahepatic biliary duct atresia 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005692 Joint hyperflexibility 
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 HP:0005792 Humeral hypoplasia 
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 HP:0005930 Abnormality of the epiphyses 
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 HP:0006297 Hypoplastic dental enamel 
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 HP:0006482 Abnormality of dental morphology 
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 HP:0006695 Tricuspid and mitral valves are replaced by a single inlet valve 
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 HP:0008081 Valgus foot deformity 
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 HP:0009623 Proximally placed thumb "Proximally displaced thumb." [HPO:curators]
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 HP:0009803 Hypoplastic/small phalanges of the hand 
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 HP:0009901 Crumpled ear helices 
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 HP:0010049 Hypoplastic/short metacarpal bones 
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 HP:0012368 Flat face "Absence of concavity or convexity of the face when viewed in profile." [pmid:19125436]
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 HP:0100255 Metaphyseal dysplasia "The presence of dysplastic regions in metaphyseal bones." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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