ENSG00000197114


Homo sapiens

Features
Gene ID: ENSG00000197114
  
Biological name :ZGPAT
  
Synonyms : Q8N5A5 / ZGPAT / zinc finger CCCH-type and G-patch domain containing
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.33
Gene start: 63707465
Gene end: 63736142
  
Corresponding Affymetrix probe sets: 221848_at (Human Genome U133 Plus 2.0 Array)   57539_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000348242
Ensembl peptide - ENSP00000391176
Ensembl peptide - ENSP00000332013
Ensembl peptide - ENSP00000403966
Ensembl peptide - ENSP00000349634
Ensembl peptide - ENSP00000358984
NCBI entrez gene - 84619     See in Manteia.
RefSeq - NM_001195654
RefSeq - NM_001083113
RefSeq - NM_001195653
RefSeq - NM_032527
RefSeq - NM_181485
RefSeq Peptide - NP_852150
RefSeq Peptide - NP_001076582
RefSeq Peptide - NP_001182582
RefSeq Peptide - NP_001182583
RefSeq Peptide - NP_115916
swissprot - Q8N5A5
swissprot - A0A0S2Z5X3
swissprot - X6RGY1
Ensembl - ENSG00000197114
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgpatENSDARG00000027403Danio rerio
 ZGPATENSGALG00000006092Gallus gallus
 ZgpatENSMUSG00000027582Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR000571  Zinc finger, CCCH-type
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007175 negative regulation of epidermal growth factor-activated receptor activity IDA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005886 plasma membrane IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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