ENSMUSG00000027582


Mus musculus

Features
Gene ID: ENSMUSG00000027582
  
Biological name :Zgpat
  
Synonyms : Q8VDM1 / Zgpat / zinc finger, CCCH-type with G patch domain
  
Possible biological names infered from orthology : Q8N5A5 / zinc finger CCCH-type and G-patch domain containing
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: H4
Gene start: 181364928
Gene end: 181383628
  
Corresponding Affymetrix probe sets: 10479596 (MoGene1.0st)   10479607 (MoGene1.0st)   1416869_x_at (Mouse Genome 430 2.0 Array)   1424548_at (Mouse Genome 430 2.0 Array)   1437589_x_at (Mouse Genome 430 2.0 Array)   1448500_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029105
Ensembl peptide - ENSMUSP00000104435
Ensembl peptide - ENSMUSP00000112067
Ensembl peptide - ENSMUSP00000122714
NCBI entrez gene - 229007     See in Manteia.
MGI - MGI:2449939
RefSeq - NM_001048148
RefSeq - NM_144894
RefSeq Peptide - NP_001041613
RefSeq Peptide - NP_659143
swissprot - F7C2Y9
swissprot - Q8VDM1
Ensembl - ENSMUSG00000027582
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgpatENSDARG00000027403Danio rerio
 ZGPATENSGALG00000006092Gallus gallus
 ZGPATENSG00000197114Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR000571  Zinc finger, CCCH-type
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007175 negative regulation of epidermal growth factor-activated receptor activity IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0013279 increased fasted circulating glucose level "increase in the amount of glucose in the blood at some defined time point after eating compared to controls" [MGI:Armida_Di_Fenza]
Show

Allelic Composition: Zfp719tm1b(EUCOMM)Wtsi/Zfp719tm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Zfp719tm1b(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr