ENSG00000197386


Homo sapiens

Features
Gene ID: ENSG00000197386
  
Biological name :HTT
  
Synonyms : HTT / huntingtin / P42858
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: p16.3
Gene start: 3074681
Gene end: 3243960
  
Corresponding Affymetrix probe sets: 202389_s_at (Human Genome U133 Plus 2.0 Array)   202390_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000347184
Ensembl peptide - ENSP00000425743
NCBI entrez gene - 3064     See in Manteia.
OMIM - 613004
RefSeq - NM_002111
RefSeq Peptide - NP_002102
swissprot - P42858
swissprot - H0YA07
Ensembl - ENSG00000197386
  
Related genetic diseases (OMIM): 143100 - Huntington disease, 143100
  617435 - Lopes-Maciel-Rodan syndrome, 617435
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 httENSDARG00000052866Danio rerio
 HTTENSGALG00000015635Gallus gallus
 HttENSMUSG00000029104Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000091  Huntingtin
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR024613  Huntingtin, middle-repeat
 IPR028426  Huntingtin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000132 establishment of mitotic spindle orientation IMP
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER IMP
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007030 Golgi organization IMP
 biological_processGO:0031587 positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity IDA
 biological_processGO:0031648 protein destabilization IMP
 biological_processGO:0042297 vocal learning IMP
 biological_processGO:0043065 positive regulation of apoptotic process IDA
 biological_processGO:0043666 regulation of phosphoprotein phosphatase activity IMP
 biological_processGO:0045724 positive regulation of cilium assembly IMP
 biological_processGO:0047496 vesicle transport along microtubule IMP
 biological_processGO:0048513 animal organ development IBA
 biological_processGO:1903599 positive regulation of autophagy of mitochondrion IMP
 biological_processGO:1904504 positive regulation of lipophagy IMP
 biological_processGO:1905337 positive regulation of aggrephagy IMP
 biological_processGO:2001237 negative regulation of extrinsic apoptotic signaling pathway IMP
 cellular_componentGO:0005634 nucleus IMP
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IMP
 cellular_componentGO:0005770 late endosome IDA
 cellular_componentGO:0005776 autophagosome IDA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005814 centriole IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016234 inclusion body IMP
 cellular_componentGO:0030424 axon IDA
 cellular_componentGO:0030425 dendrite IDA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IDA
 cellular_componentGO:0032991 protein-containing complex IMP
 cellular_componentGO:0048471 perinuclear region of cytoplasm IMP
 molecular_functionGO:0002039 p53 binding IPI
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005522 profilin binding IPI
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0019900 kinase binding IPI
 molecular_functionGO:0031072 heat shock protein binding IPI
 molecular_functionGO:0034452 dynactin binding IPI
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0044325 ion channel binding IDA
 molecular_functionGO:0045505 dynein intermediate chain binding IDA
 molecular_functionGO:0048487 beta-tubulin binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000496 Abnormality of eye movement "An abnormality in voluntary or involuntary eye movements or their control." [HPO:probinson]
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 HP:0000708 Behavioural/Psychiatric Abnormality 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000726 Dementia 
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 HP:0000737 Irritability 
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 HP:0000751 Personality changes 
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 HP:0000752 Hyperactivity 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001608 Abnormality of the voice "Any abnormality of the voice." [HPO:curators]
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 HP:0001824 Weight loss 
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 HP:0002063 Rigidity 
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 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
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 HP:0002067 Bradykinesia "Bradykinesia literally means slow movement, and is used clinically to denote a slowness in the execution of movement (in contrast to hypokinesia, which is used to refer to slowness in the initiation of movement)." [HPO:curators]
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 HP:0002072 Chorea "Chorea (Greek for dance ) refers to widespread arrhythmic involuntary movements of a forcible, jerky and restless fashion." [HPO:curators]
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 HP:0002073 Progressive cerebellar ataxia 
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 HP:0002119 Ventriculomegaly 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002136 Broad-based gait "An abnormal gait pattern in which persons stand and walk with their feet spaced widely apart. This is often a component of cerebellar ataxia." [HPO:curators]
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 HP:0002171 Gliosis 
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0002376 Developmental regression 
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 HP:0002500 Abnormality of the cerebral white matter 
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 HP:0002529 Neuropathology shows neuronal loss in basal ganglia, brainstem, and cerebellum 
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 HP:0006855 Cerebellar vermis atrophy 
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 HP:0012547 Abnormal involuntary eye movements "Anomalous movements of the eyes that occur without the subject wanting them to happen." [HPO:probinson]
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 HP:0030190 Oral motor hypotonia "Reduced muscle tone of oral musculature. In infants, this feature may be associated with difficulties in breast feeding, and may affetc the latch, jaw motions, tongue placement, lip seal, suck/swallow/breathe pattern and overall feeding behavior." []
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 HP:0100022 Abnormality of movement "An abnormality of movement with a neurological basis characterized by changes in coordination and speed of voluntary movements." [HPO:probinson]
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 HP:0200147 Neuronal loss in basal ganglia 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000169057 MECP2 / P51608 / methyl-CpG binding protein 2  / reaction / complex






 

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