ENSG00000198862


Homo sapiens

Features
Gene ID: ENSG00000198862
  
Biological name :LTN1
  
Synonyms : listerin E3 ubiquitin protein ligase 1 / LTN1 / O94822
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 21
Strand: -1
Band: q21.3
Gene start: 28928144
Gene end: 28992956
  
Corresponding Affymetrix probe sets: 215596_s_at (Human Genome U133 Plus 2.0 Array)   233818_at (Human Genome U133 Plus 2.0 Array)   233819_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000373846
Ensembl peptide - ENSP00000474690
Ensembl peptide - ENSP00000478783
Ensembl peptide - ENSP00000354977
Ensembl peptide - ENSP00000373847
NCBI entrez gene - 26046     See in Manteia.
OMIM - 613083
RefSeq - XM_017028317
RefSeq - NM_001320766
RefSeq - NM_015565
RefSeq - XM_006723987
RefSeq - XM_017028316
RefSeq Peptide - NP_001307695
RefSeq Peptide - NP_056380
swissprot - O94822
swissprot - S4R3T2
swissprot - H7BYG8
Ensembl - ENSG00000198862
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LTN1ENSDARG00000003984Danio rerio
 LTN1ENSGALG00000015804Gallus gallus
 Ltn1ENSMUSG00000052299Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR011016  Zinc finger, RING-CH-type
 IPR011989  Armadillo-like helical
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0051865 protein autoubiquitination IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr