ENSGALG00000015804


Gallus gallus

Features
Gene ID: ENSGALG00000015804
  
Biological name :LTN1
  
Synonyms : listerin E3 ubiquitin protein ligase 1 / LTN1
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase listerin / O94822 / Q6A009
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 103956431
Gene end: 103984023
  
Corresponding Affymetrix probe sets: Gga.1214.1.S1_at (Chicken Array)   Gga.14653.1.S1_at (Chicken Array)   GgaAffx.24776.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000025437
NCBI entrez gene - 418482     See in Manteia.
RefSeq - NM_001305161
RefSeq Peptide - NP_001292090
swissprot - A0A1I7Q424
Ensembl - ENSGALG00000015804
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LTN1ENSDARG00000003984Danio rerio
 LTN1ENSG00000198862Homo sapiens
 Ltn1ENSMUSG00000052299Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051865 protein autoubiquitination IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr