ENSG00000204291


Homo sapiens

Features
Gene ID: ENSG00000204291
  
Biological name :COL15A1
  
Synonyms : COL15A1 / collagen type XV alpha 1 chain / P39059
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q22.33
Gene start: 98943179
Gene end: 99070792
  
Corresponding Affymetrix probe sets: 203477_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000364140
Ensembl peptide - ENSP00000483455
NCBI entrez gene - 1306     See in Manteia.
OMIM - 120325
RefSeq - NM_001855
RefSeq - XM_011518214
RefSeq Peptide - NP_001846
swissprot - A0A087X0K0
swissprot - P39059
Ensembl - ENSG00000204291
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 col15a1bENSDARG00000061848Danio rerio
 COL15A1ENSGALG00000034119Gallus gallus
 O35206ENSMUSG00000028339Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P39060 / COL18A1 / collagen type XVIII alpha 1 chainENSG0000018287135


Protein motifs (from Interpro)
Interpro ID Name
 IPR001791  Laminin G domain
 IPR008160  Collagen triple helix repeat
 IPR010515  Collagenase NC10/endostatin
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR016133  Insect cysteine-rich antifreeze protein
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007165 signal transduction NAS
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030574 collagen catabolic process TAS
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005582 collagen type XV trimer TAS
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0016021 integral component of membrane NAS
 cellular_componentGO:0031012 extracellular matrix IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Collagen degradation
Collagen biosynthesis and modifying enzymes
Assembly of collagen fibrils and other multimeric structures
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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