ENSG00000205323


Homo sapiens

Features
Gene ID: ENSG00000205323
  
Biological name :SARNP
  
Synonyms : P82979 / SAP domain containing ribonucleoprotein / SARNP
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.2
Gene start: 55752463
Gene end: 55817756
  
Corresponding Affymetrix probe sets: 224914_s_at (Human Genome U133 Plus 2.0 Array)   229069_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000449409
Ensembl peptide - ENSP00000337632
Ensembl peptide - ENSP00000447690
Ensembl peptide - ENSP00000448455
NCBI entrez gene - 84324     See in Manteia.
OMIM - 610049
RefSeq - NM_033082
RefSeq Peptide - NP_149073
swissprot - F8VS12
swissprot - F8VZQ9
swissprot - P82979
Ensembl - ENSG00000205323
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sarnpENSDARG00000059357Danio rerio
 Gm6563ENSMUSG00000051255Mus musculus
 SarnpENSMUSG00000078427Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003034  SAP domain
 IPR036361  SAP domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006369 termination of RNA polymerase II transcription TAS
 biological_processGO:0006405 RNA export from nucleus TAS
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0031124 mRNA 3"-end processing TAS
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0000346 transcription export complex IDA
 cellular_componentGO:0005634 nucleus NAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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