ENSG00000215853


Homo sapiens

Features
Gene ID: ENSG00000215853
  
Biological name :RPTN
  
Synonyms : Q6XPR3 / repetin / RPTN
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q21.3
Gene start: 152153595
Gene end: 152159228
  
Corresponding Affymetrix probe sets: 1553454_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000317895
NCBI entrez gene - 126638     See in Manteia.
OMIM - 613259
RefSeq - NM_001122965
RefSeq Peptide - NP_001116437
swissprot - Q6XPR3
Ensembl - ENSG00000215853
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRNNENSGALG00000027316Gallus gallus
 RptnENSMUSG00000041984Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FLG2 / Q5D862 / filaggrin family member 2ENSG0000014352030
HRNR / Q86YZ3 / hornerinENSG0000019791527
TCHH / Q07283 / trichohyalinENSG0000015945024
FLG / P20930 / filaggrinENSG0000014363123
CRNN / Q9UBG3 / cornulinENSG0000014353618
Q5QJ38 / TCHHL1 / trichohyalin like 1ENSG0000018289816


Protein motifs (from Interpro)
Interpro ID Name
 IPR001751  S100/Calbindin-D9k, conserved site
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR013787  S100/CaBP-9k-type, calcium binding, subdomain
 IPR018247  EF-Hand 1, calcium-binding site
 IPR033198  Repetin
 IPR034325  S-100


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0070268 cornification TAS
 cellular_componentGO:0001533 cornified envelope TAS
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046914 transition metal ion binding IEA


Pathways (from Reactome)
Pathway description
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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