ENSMUSG00000041984


Mus musculus

Features
Gene ID: ENSMUSG00000041984
  
Biological name :Rptn
  
Synonyms : P97347 / Repetin / Rptn
  
Possible biological names infered from orthology : Q6XPR3
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: F2.1
Gene start: 93393699
Gene end: 93399442
  
Corresponding Affymetrix probe sets: 10493979 (MoGene1.0st)   1420431_at (Mouse Genome 430 2.0 Array)   1433210_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000044998
NCBI entrez gene - 20129     See in Manteia.
MGI - MGI:1099055
RefSeq - NM_009100
RefSeq Peptide - NP_033126
swissprot - P97347
Ensembl - ENSMUSG00000041984
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRNNENSGALG00000027316Gallus gallus
 RPTNENSG00000215853Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Hrnr / Q86YZ3* / hornerin*ENSMUSG0000004199119
Flg2 / filaggrin-2 / Q5D862* / filaggrin family member 2*ENSMUSG0000004913317
Tchh / Q07283* / trichohyalin*ENSMUSG0000005241516
Crnn / cornulin / Q9UBG3*ENSMUSG0000007865710
Q9D3P1 / Tchhl1 / Trichohyalin-like protein 1 / Q5QJ38* / trichohyalin like 1*ENSMUSG000000279087
Flg / P20930* / filaggrin*ENSMUSG000001024396


Protein motifs (from Interpro)
Interpro ID Name
 IPR001751  S100/Calbindin-D9k, conserved site
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR013787  S100/CaBP-9k-type, calcium binding, subdomain
 IPR018247  EF-Hand 1, calcium-binding site
 IPR033198  Repetin
 IPR034325  S-100


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0001533 cornified envelope IDA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046914 transition metal ion binding IEA


Pathways (from Reactome)
Pathway description
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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