ENSMUSG00000052415


Mus musculus

Features
Gene ID: ENSMUSG00000052415
  
Biological name :Tchh
  
Synonyms : Tchh
  
Possible biological names infered from orthology : Q07283 / trichohyalin
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: F2.1
Gene start: 93442330
Gene end: 93449077
  
Corresponding Affymetrix probe sets: 10493984 (MoGene1.0st)   1434425_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000069525
NCBI entrez gene - 99681     See in Manteia.
MGI - MGI:2177944
RefSeq - NM_001163098
RefSeq Peptide - NP_001156570
swissprot - A0A0B4J1F9
Ensembl - ENSMUSG00000052415
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRNNENSGALG00000027316Gallus gallus
 TCHHENSG00000159450Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rptn / P97347 / Repetin / Q6XPR3*ENSMUSG0000004198412
Flg2 / filaggrin-2 / Q5D862* / filaggrin family member 2*ENSMUSG000000491339
Hrnr / Q86YZ3* / hornerin*ENSMUSG000000419917
Crnn / cornulin / Q9UBG3*ENSMUSG000000786576
Q9D3P1 / Tchhl1 / Trichohyalin-like protein 1 / Q5QJ38* / trichohyalin like 1*ENSMUSG000000279085
Flg / P20930* / filaggrin*ENSMUSG000001024394


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR013787  S100/CaBP-9k-type, calcium binding, subdomain
 IPR018247  EF-Hand 1, calcium-binding site
 IPR034325  S-100


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045109 intermediate filament organization IDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0030674 protein binding, bridging IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046914 transition metal ion binding IEA


Pathways (from Reactome)
Pathway description
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr