ENSMUSG00000027908


Mus musculus

Features
Gene ID: ENSMUSG00000027908
  
Biological name :Tchhl1
  
Synonyms : Q9D3P1 / Tchhl1 / Trichohyalin-like protein 1
  
Possible biological names infered from orthology : Q5QJ38 / trichohyalin like 1
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: F2.1
Gene start: 93468754
Gene end: 93471980
  
Corresponding Affymetrix probe sets: 10493986 (MoGene1.0st)   1429944_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029516
NCBI entrez gene - 71325     See in Manteia.
MGI - MGI:1918575
RefSeq - NM_027762
RefSeq Peptide - NP_082038
swissprot - Q9D3P1
Ensembl - ENSMUSG00000027908
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRNNENSGALG00000027316Gallus gallus
 Q5QJ38ENSG00000182898Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tchh / Q07283* / trichohyalin*ENSMUSG0000005241512
Hrnr / Q86YZ3* / hornerin*ENSMUSG0000004199112
Flg2 / filaggrin-2 / Q5D862* / filaggrin family member 2*ENSMUSG0000004913312
Rptn / P97347 / Repetin / Q6XPR3*ENSMUSG0000004198411
Crnn / cornulin / Q9UBG3*ENSMUSG0000007865710
Flg / P20930* / filaggrin*ENSMUSG000001024399


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR013787  S100/CaBP-9k-type, calcium binding, subdomain
 IPR034325  S-100


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0006364 rRNA processing IBA
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046914 transition metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr