ENSG00000217930


Homo sapiens

Features
Gene ID: ENSG00000217930
  
Biological name :PAM16
  
Synonyms : PAM16 / presequence translocase associated motor 16 / Q9Y3D7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p13.3
Gene start: 4331549
Gene end: 4355607
  
Corresponding Affymetrix probe sets: 218969_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000460434
Ensembl peptide - ENSP00000461047
Ensembl peptide - ENSP00000460708
Ensembl peptide - ENSP00000315693
Ensembl peptide - ENSP00000458412
Ensembl peptide - ENSP00000458914
Ensembl peptide - ENSP00000459113
Ensembl peptide - ENSP00000459802
Ensembl peptide - ENSP00000459955
NCBI entrez gene - 51025     See in Manteia.
OMIM - 614336
RefSeq - NM_016069
RefSeq Peptide - NP_057153
swissprot - I3L1U7
swissprot - I3L3G8
swissprot - I3L3T0
swissprot - A0A0B4J298
swissprot - Q9Y3D7
swissprot - I3L0X9
swissprot - I3L1K9
Ensembl - ENSG00000217930
  
Related genetic diseases (OMIM): 613320 - Spondylometaphyseal dysplasia, Megarbane-Dagher-Melike type, 613320
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CORO7-PAM16 / CORO7-PAM16 readthroughENSG0000010342699
CORO2A / Q92828 / coronin 2AENSG000001067891
CORO1B / Q9BR76 / coronin 1BENSG000001727251
CORO6 / Q6QEF8 / coronin 6ENSG000001675491
CORO2B / Q9UQ03 / coronin 2BENSG000001036470
CORO7 / P57737 / coronin 7ENSG000002622460
CORO1C / Q9ULV4 / coronin 1CENSG000001108800
CORO1A / P31146 / coronin 1AENSG000001028790


Protein motifs (from Interpro)
Interpro ID Name
 IPR005341  Mitochondrial import inner membrane translocase subunit Tim16
 IPR036869  Chaperone J-domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001503 ossification IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030150 protein import into mitochondrial matrix IGI
 biological_processGO:0032780 negative regulation of ATPase activity IDA
 cellular_componentGO:0001405 presequence translocase-associated import motor IGI
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0005744 mitochondrial inner membrane presequence translocase complex IEA
 cellular_componentGO:0005759 mitochondrial matrix IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031314 extrinsic component of mitochondrial inner membrane IDA
 cellular_componentGO:0032991 protein-containing complex IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Mitochondrial protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000239 Large fontanelles "In newborns, the two frontal bones, two parietal bones, and one occipital bone are joined by fibrous sutures, which form a small posterior fontanelle, and a larger, diamond-shaped anterior fontanelle. These regions allow for the skull to pass the birth canal and for later growth. The fontanelles gradually ossify, whereby the posterior fontanelle usually closes by eight weeks and the anterior fontanelle by the 9th to 16th month of age. Large fontanelles are diagnosed if the fontanelles are larger than age-dependent norms." [HPO:curators]
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000445 Broad nose 
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000470 Short neck 
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 HP:0000773 Short ribs 
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 HP:0000774 Narrow chest 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001518 Low birth weight 
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 HP:0001591 Bell-shaped chest 
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 HP:0001640 Cardiomegaly 
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 HP:0002002 Deep philtrum 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002092 Pulmonary hypertension 
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 HP:0002645 Wormian bones 
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 HP:0002657 Spondylometaphyseal dysplasia 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002789 Tachypnea 
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 HP:0002983 Micromelia 
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 HP:0003021 Metaphyseal cupping "Metaphyseal cupping refers to an inward bulging of the metaphyseal profile giving the metaphysis a cup-like appearance." [HPO:curators]
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 HP:0003026 Short long bones 
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 HP:0003175 Hypoplastic ischia 
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 HP:0003177 Square iliac bones 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004565 severe platyspondyly 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0008551 Underdeveloped ears 
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 HP:0008786 Irregular, lacy iliac crests "Lace-like irregularity of the iliac crest." [HPO:curators]
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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