ENSG00000248871


Homo sapiens

Features
Gene ID: ENSG00000248871
  
Biological name :TNFSF12-TNFSF13
  
Synonyms : TNFSF12-TNFSF13 / TNFSF12-TNFSF13 readthrough
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p13.1
Gene start: 7549099
Gene end: 7561601
  
Corresponding Affymetrix probe sets: 209499_x_at (Human Genome U133 Plus 2.0 Array)   209500_x_at (Human Genome U133 Plus 2.0 Array)   210314_x_at (Human Genome U133 Plus 2.0 Array)   211495_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000293826
NCBI entrez gene - 407977     See in Manteia.
RefSeq - NM_172089
RefSeq Peptide - NP_742086
swissprot - A0A0A6YY99
Ensembl - ENSG00000248871
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnfsf13ENSDARG00000091556Danio rerio
 Tnfsfm13ENSMUSG00000018752Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O43508 / TNFSF12 / TNF superfamily member 12ENSG0000023969755
O75888 / TNFSF13 / TNF superfamily member 13ENSG0000016195544
Q9Y275 / TNFSF13B / TNF superfamily member 13bENSG0000010252420


Protein motifs (from Interpro)
Interpro ID Name
 IPR006052  Tumour necrosis factor domain
 IPR008983  Tumour necrosis factor-like domain superfamily
 IPR021184  Tumour necrosis factor, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response IEA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005125 cytokine activity IEA
 molecular_functionGO:0005164 tumor necrosis factor receptor binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr