ENSG00000259956


Homo sapiens

Features
Gene ID: ENSG00000259956
  
Biological name :RBM15B
  
Synonyms : Q8NDT2 / RBM15B / RNA binding motif protein 15B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p21.2
Gene start: 51391268
Gene end: 51397908
  
Corresponding Affymetrix probe sets: 202689_at (Human Genome U133 Plus 2.0 Array)   226987_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000454545
NCBI entrez gene - 29890     See in Manteia.
OMIM - 612602
RefSeq - NM_013286
RefSeq Peptide - NP_037418
swissprot - Q8NDT2
Ensembl - ENSG00000259956
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm15bENSDARG00000078966Danio rerio
 ENSGALG00000002372Gallus gallus
 Q6PHZ5ENSMUSG00000074102Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBM15 / Q96T37 / RNA binding motif protein 15ENSG0000016277545
SPEN / Q96T58 / spen family transcriptional repressorENSG0000006552622


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR010912  Spen paralogue/orthologue C-terminal, metazoa
 IPR012921  Spen paralogue and orthologue SPOC, C-terminal
 IPR016194  SPOC-like, C-terminal domain superfamily
 IPR034475  RBM15B, RNA recognition motif 1
 IPR034535  RBM15B, RNA recognition motif 2
 IPR034536  RBM15B, RNA recognition motif 3
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0016032 viral process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IBA
 molecular_functionGO:0003723 RNA binding NAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr